Creating (small) graphs via a simple interfaceSource:
This function is useful if you want to create a small (named) graph quickly, it works for both directed and undirected graphs.
graph_from_literal()the formulae giving the structure of the graph, see details below. For
from_literal()all arguments are passed to
Logical scalar, whether to call
simplify()on the created graph. By default the graph is simplified, loop and multiple edges are removed.
graph_from_literal() is very handy for creating small graphs quickly.
You need to supply one or more R expressions giving the structure of
the graph. The expressions consist of vertex names and edge
operators. An edge operator is a sequence of ‘
+’ characters, the former is for the edges and the
latter is used for arrow heads. The edges can be arbitrarily long,
i.e. you may use as many ‘
-’ characters to “draw”
them as you like.
If all edge operators consist of only ‘
then the graph will be undirected, whereas a single ‘
character implies a directed graph.
Let us see some simple examples. Without arguments the function creates an empty graph:
A simple undirected graph with two vertices called ‘A’ and ‘B’ and one edge only:
Remember that the length of the edges does not matter, so we could have written the following, this creates the same graph:
graph_from_literal( A-----B )
If you have many disconnected components in the graph, separate them with commas. You can also give isolate vertices.
graph_from_literal( A--B, C--D, E--F, G--H, I, J, K )
:’ operator can be used to define vertex sets. If
an edge operator connects two vertex sets then every vertex from the
first set will be connected to every vertex in the second set. The
following form creates a full graph, including loop edges:
graph_from_literal( A:B:C:D -- A:B:C:D )
In directed graphs, edges will be created only if the edge operator includes a arrow head (‘+’) at the end of the edge:
graph_from_literal( A -+ B -+ C ) graph_from_literal( A +- B -+ C ) graph_from_literal( A +- B -- C )
Thus in the third example no edge is created between vertices
Mutual edges can be also created with a simple edge operator:
graph_from_literal( A +-+ B +---+ C ++ D + E)
Note again that the length of the edge operators is arbitrary,
++’ and ‘
exactly the same meaning.
If the vertex names include spaces or other special characters then you need to quote them:
graph_from_literal( "this is" +- "a silly" -+ "graph here" )
You can include any character in the vertex names this way, even ‘+’ and ‘-’ characters.
See more examples below.
Other deterministic constructors:
# A simple undirected graph g <- graph_from_literal( Alice - Bob - Cecil - Alice, Daniel - Cecil - Eugene, Cecil - Gordon ) g #> IGRAPH a6ef2ff UN-- 6 6 -- #> + attr: name (v/c) #> + edges from a6ef2ff (vertex names): #>  Alice--Bob Alice--Cecil Bob --Cecil Cecil--Daniel Cecil--Eugene #>  Cecil--Gordon # Another undirected graph, ":" notation g2 <- graph_from_literal(Alice - Bob:Cecil:Daniel, Cecil:Daniel - Eugene:Gordon) g2 #> IGRAPH 4db1689 UN-- 6 7 -- #> + attr: name (v/c) #> + edges from 4db1689 (vertex names): #>  Alice --Bob Alice --Cecil Alice --Daniel Cecil --Eugene Cecil --Gordon #>  Daniel--Eugene Daniel--Gordon # A directed graph g3 <- graph_from_literal( Alice +-+ Bob --+ Cecil +-- Daniel, Eugene --+ Gordon:Helen ) g3 #> IGRAPH 99651ab DN-- 7 6 -- #> + attr: name (v/c) #> + edges from 99651ab (vertex names): #>  Alice ->Bob Bob ->Alice Bob ->Cecil Daniel->Cecil Eugene->Gordon #>  Eugene->Helen # A graph with isolate vertices g4 <- graph_from_literal(Alice -- Bob -- Daniel, Cecil:Gordon, Helen) g4 #> IGRAPH e437b84 UN-- 6 2 -- #> + attr: name (v/c) #> + edges from e437b84 (vertex names): #>  Alice--Bob Bob --Daniel V(g4)$name #>  "Alice" "Bob" "Daniel" "Cecil" "Gordon" "Helen" # "Arrows" can be arbitrarily long g5 <- graph_from_literal(Alice +---------+ Bob) g5 #> IGRAPH 067c706 DN-- 2 2 -- #> + attr: name (v/c) #> + edges from 067c706 (vertex names): #>  Alice->Bob Bob ->Alice # Special vertex names g6 <- graph_from_literal("+" -- "-", "*" -- "/", "%%" -- "%/%") g6 #> IGRAPH b2cc704 UN-- 6 3 -- #> + attr: name (v/c) #> + edges from b2cc704 (vertex names): #>  + --- * --/ %%--%/%